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Supplementary resources

Bogumil and Dagan 2010

Chaperonin-dependent accelerated substitution rates in prokaryotes.
David Bogumil and Tal Dagan
Genome Biol Evol 2:602-8 (2010).

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Popa et al. 2011

Directed networks reveal genomic barriers and DNA repair bypasses to lateral gene transfer among prokaryotes.
Ovidiu Popa, Einat Hazkani-Covo, Giddy Landan, William Martin, Tal Dagan
Genome Res 21:599-609 (2011).

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Kloesges et al. 2011

Networks of gene sharing among 329 proteobacterial genomes reveal differences in lateral gene transfer frequency at different phylogenetic depths.
Thorsten Kloesges, Ovidiu Popa, William Martin, Tal Dagan
Mol Biol Evol 28:1057-74 (2011).

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Nelson-Sathi et al. 2011

Networks uncover hidden lexical borrowing in Indo-European language evolution.
Shijulal Nelson-Sathi, Johann-Mattis List, Hans Geisler, Heiner Fangerau, Russell D. Gray, William Martin, Tal Dagan
Proc Biol Sci 278:1794-803 (2011).

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Woehle et al. 2011

Red and Problematic Green Phylogenetic Signals among Thousands of Nuclear Genes from the Photosynthetic and Apicomplexa-Related Chromera velia.
Christian Woehle, Tal Dagan, William F. Martin, and Sven B. Gould
Genome Biol Evol 3:1220-30 (2011).

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Waegele et al. 2011

Transcriptomic evidence that longevity of acquired plastids in the photosynthetic slugs Elysia timida and Plakobrachus ocellatus does not entail lateral transfer of algal nuclear genes.
Heike Waegele, Oliver Deusch, Katharina Haendeler, Rainer Martin, Valerie Schmitt, Gregor Christa, Britta Pinzger, Sven B. Gould, Tal Dagan, Annette Klussmann-Kolb, William Martin
Mol Biol Evol 28:699-706 (2011).

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Dagan et al. 2008

Modular networks and cumulative impact of lateral transfer in prokaryote genome evolution.
Tal Dagan, Yael Artzy-Randrup, William Martin
Proc Natl Acad Sci U S A 105:10039-44 (2008).

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